#!/bin/bash -e
hgLoadEnsembl -f superfam_18Mar2007 -l /cluster/store8/ensembl/run.build43/lift.hg18 homo_sapiens core_43_36e /cluster/store8/ensembl/homo_sapiens_43_36e hg18
hgLoadEnsembl -l /cluster/store8/ensembl/run.build43/lift.mm8 mus_musculus core_43_36d /cluster/store8/ensembl/mus_musculus_43_36d mm8
hgLoadEnsembl rattus_norvegicus core_43_34m /cluster/store8/ensembl/rattus_norvegicus_43_34m rn4
hgLoadEnsembl pan_troglodytes core_43_21b /cluster/store8/ensembl/pan_troglodytes_43_21b panTro2
hgLoadEnsembl macaca_mulatta core_43_10c /cluster/store8/ensembl/macaca_mulatta_43_10c rheMac2
hgLoadEnsembl tupaia_belangeri core_43_1 /cluster/store8/ensembl/tupaia_belangeri_43_1 tupBel1
hgLoadEnsembl canis_familiaris core_43_2a /cluster/store8/ensembl/canis_familiaris_43_2a canFam2
#hgLoadEnsembl felis_catus core_43_1 /cluster/store8/ensembl/felis_catus_43_1 felCat3
hgLoadEnsembl bos_taurus core_43_3 /cluster/store8/ensembl/bos_taurus_43_3 bosTau3
hgLoadEnsembl dasypus_novemcinctus core_43_1b /cluster/store8/ensembl/dasypus_novemcinctus_43_1b dasNov1
hgLoadEnsembl gallus_gallus core_43_2a /cluster/store8/ensembl/gallus_gallus_43_2a galGal3
hgLoadEnsembl oryctolagus_cuniculus core_43_1b /cluster/store8/ensembl/oryctolagus_cuniculus_43_1b oryCun1
hgLoadEnsembl danio_rerio core_43_6d /cluster/store8/ensembl/danio_rerio_43_6d danRer4
hgLoadEnsembl monodelphis_domestica core_43_3c /cluster/store8/ensembl/monodelphis_domestica_43_3c monDom4
hgLoadEnsembl oryzias_latipes core_43_1a /cluster/store8/ensembl/oryzias_latipes_43_1a oryLat1
hgLoadEnsembl echinops_telfairi core_43_1b /cluster/store8/ensembl/echinops_telfairi_43_1b echTel1
#hgLoadEnsembl loxodonta_africana core_43_1b /cluster/store8/ensembl/loxodonta_africana_43_1b loxAfr1
hgLoadEnsembl gasterosteus_aculeatus core_43_1b /cluster/store8/ensembl/gasterosteus_aculeatus_43_1b gasAcu1
hgLoadEnsembl ornithorhynchus_anatinus core_43_1a /cluster/store8/ensembl/ornithorhynchus_anatinus_43_1a ornAna1
hgLoadEnsembl xenopus_tropicalis core_43_41d /cluster/store8/ensembl/xenopus_tropicalis_43_41d xenTro2
hgLoadEnsembl tetraodon_nigroviridis core_43_1h /cluster/store8/ensembl/tetraodon_nigroviridis_43_1h tetNig1
hgLoadEnsembl -l /cluster/data/fr2/jkStuff/liftAll.lft takifugu_rubripes core_43_4e /cluster/store8/ensembl/takifugu_rubripes_43_4e fr2
hgLoadEnsembl ciona_intestinalis core_43_2e /cluster/store8/ensembl/ciona_intestinalis_43_2e ci2
hgLoadEnsembl ciona_savignyi core_43_2c /cluster/store8/ensembl/ciona_savignyi_43_2c cioSav2
hgLoadEnsembl caenorhabditis_elegans core_43_160a /cluster/store8/ensembl/caenorhabditis_elegans_43_160a ce4
hgLoadEnsembl drosophila_melanogaster core_43_43a /cluster/store8/ensembl/drosophila_melanogaster_43_43a dm3
hgLoadEnsembl anopheles_gambiae core_43_3f /cluster/store8/ensembl/anopheles_gambiae_43_3f anoGam1
hgLoadEnsembl saccharomyces_cerevisiae core_43_1f /cluster/store8/ensembl/saccharomyces_cerevisiae_43_1f sacCer1
