# Summary Plots with Adjusted Error Bars

## Documentation for package ‘superb’ version 1.0.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

B C D E F G H I M P R S T W

## -- B --

biasCorrectionTransform | bias-correction transform
bootstrapPI.gmean | Bootstrapped measures of precision
bootstrapPI.hmean | Bootstrapped measures of precision
bootstrapPI.mean | Bootstrapped measures of precision
bootstrapPI.median | Bootstrapped measures of precision
bootstrapPI.sd | Bootstrapped measures of precision
bootstrapPI.var | Bootstrapped measures of precision
bootstrapPrecisionMeasures | Bootstrapped measures of precision
bootstrapSE.gmean | Bootstrapped measures of precision
bootstrapSE.hmean | Bootstrapped measures of precision
bootstrapSE.mean | Bootstrapped measures of precision
bootstrapSE.median | Bootstrapped measures of precision
bootstrapSE.sd | Bootstrapped measures of precision
bootstrapSE.var | Bootstrapped measures of precision

## -- C --

CI.fisherkurtosis | Precision measures
CI.fisherskew | Precision measures
CI.gmean | Precision measures
CI.hmean | Precision measures
CI.IQR | Precision measures
CI.MAD | Precision measures
CI.mean | Precision measures
CI.meanNArm | Measures with missing data
CI.median | Precision measures
CI.pearsonskew | Precision measures
CI.sd | Precision measures
CI.var | Precision measures
CIwithDF.mean | Confidence intervals with custom degree of freedom
CousineauLaurencelleLambda | Cousineau-Laurencelle's lambda correction for cluster-randomized sampling
custom | Effect description

## -- D --

dataFigure1 | Data for Figure 1
dataFigure2 | Data for Figure 2
dataFigure3 | Data for Figure 3
dataFigure4 | Data for Figure 4

## -- E --

extent | Effect description

## -- F --

fisherkurtosis | Additional summary statistics
fisherskew | Additional summary statistics

## -- G --

geom_flat_violin | geom_flat_violin for expanded density displays
geom_superberrorbar | geom_superberrorbar for expanded error bar displays
gmean | Additional summary statistics
GRD | Generate random data

## -- H --

has.cbind.terms | logical functions for formulas
has.crange.terms | logical functions for formulas
has.nested.terms | logical functions for formulas
hmean | Additional summary statistics
HyunhFeldtEpsilon | Hyunh and Feldt's epsilon measure of sphericity

## -- I --

in.formula | logical functions for formulas
is.formula | logical functions for formulas
is.one.sided | logical functions for formulas

## -- M --

MAD | Additional summary statistics
makeTransparent | makes ggplots with transparent elements
MauchlySphericityTest | Mauchly's test of Sphericity
meanNArm | Measures with missing data
meanNArm, | Measures with missing data
measuresWithMissingData | Measures with missing data

## -- P --

pearsonskew | Additional summary statistics
poolSDTransform | pooled standard deviation transform
precisionMeasures | Precision measures
precisionMeasureWithCustomDF | Confidence intervals with custom degree of freedom

## -- R --

Rexpression | Effect description
runDebug | runDebug

## -- S --

SE.fisherkurtosis | Precision measures
SE.fisherskew | Precision measures
SE.gmean | Precision measures
SE.hmean | Precision measures
SE.IQR | Precision measures
SE.MAD | Precision measures
SE.mean | Precision measures
SE.meanNArm | Measures with missing data
SE.median | Precision measures
SE.pearsonskew | Precision measures
SE.sd | Precision measures
SE.var | Precision measures
showHorizontalSignificance | Annotate significance of results on plots
showSignificance | Annotate significance of results on plots
showVerticalSignificance | Annotate significance of results on plots
ShroutFleissICC1 | Shrout and Fleiss intra-class correlation functions
ShroutFleissICC11 | Shrout and Fleiss intra-class correlation functions
ShroutFleissICC1k | Shrout and Fleiss intra-class correlation functions
slope | Effect description
sub.formulas | logical functions for formulas
subjectCenteringTransform | subject-centering transform
summaryStatistics | Additional summary statistics
superb | superb
superbData | Obtain summary statistics with correct error bars.
superbPlot | summary plot of any statistics with adjusted error bars.
superbPlot.bar | superbPlot 'bar' layout
superbPlot.boxplot | superbPlot 'boxplot' layout
superbPlot.circularline | superbPlot 'circularline' layout
superbPlot.circularlineBand | superbPlot 'circularlineBand' layout
superbPlot.circularpoint | superbPlot 'circularpoint' layout
superbPlot.circularpointjitter | superbPlot 'circularpointjitter' layout
superbPlot.circularpointlinejitter | superbPlot 'circularpointlinejitter' layout
superbPlot.corset | superbPlot 'corset' layout
superbPlot.halfwidthline | superbPlot 'halfwidthline' layout
superbPlot.line | superbPlot 'line' layout
superbPlot.lineBand | superbPlot 'lineBand' layout
superbPlot.point | superbPlot 'point' layout
superbPlot.pointindividualline | superbPlot point and individual-line layout for within-subject design
superbPlot.pointjitter | superbPlot point-and-jitter dots layout
superbPlot.pointjitterviolin | superbPlot point, jitter and violin plot layout
superbPlot.pointlinejitter | superbPlot point-and-jitter lines layout
superbPlot.raincloud | superbPlot 'raincloud' layout
superbShiny | User Interface to get summary plot of any statistics with adjusted error bars.
superbToWide | superbToWide: Reshape long data frame to wide, suitable for superbPlot

## -- T --

TMB1964r | Data of Tulving, Mandler, & Baumal, 1964 (reproduction of 2021)
twoStepTransform | two-step transform for subject centering and bias correction

## -- W --

WelchDegreeOfFreedom | Welch's rectified degree of freedom
WinerCompoundSymmetryTest | Winer's test of compound symmetry