# Assessing Package Risk Metrics

## Documentation for package ‘risk.assessr’ version 3.1.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

assess_pkg_r_package | Assess an R package by name (deprecated)
average_issue_close_time | Calculate Average Time to Close GitHub Issues
bioconductor_reverse_deps | Find Bioconductor Package Reverse Dependencies
build_dependency_tree | Build a Dependency Tree for an R Package
check_and_fetch_cran_package | Check and Fetch CRAN Package
check_cran_package | Check if a Package Exists on CRAN
check_forbidden_notes | Reclassify Forbidden Notes as Errors in rcmdcheck Results
check_suggested_exp_funcs | Function to check suggested exported functions
contains_vignette_folder | Check for Vignette Folder and .Rmd Files in a .tar File
count_commits_last_months | Count Commits in the Last Months
cran_packages | Retrieve the List of CRAN Packages (Internal)
cran_revdep | Find Reverse Dependencies of a CRAN Package
create_coverage_skip_stf | Run covr with failing tests
create_traceability_matrix | Create a Traceability Matrix
dependsOnPkgs | Determine Packages that Depend on Given Packages
detect_version_conflicts | Detect Version Conflicts from dependency tree
download_and_parse_dependencies | Download and Parse Dependencies of an R Package
extract_package_version | Extract the Installed Version of a Package
extract_thresholds_by_id | Extract risk thresholds by id
extract_thresholds_by_key | Extract risk thresholds by key
extract_version | Extract Package Version from File Path
fetch_all_dependencies | Fetch All Dependencies for a Package
fetch_bioconductor_package_info | Fetch Bioconductor Package Information
fetch_bioconductor_releases | Fetch Bioconductor Release Announcements
generate_html_report | Generate HTML Report for Package Assessment
generate_traceability_matrix | Assess an R Package traceability matrix from package name and version
get_bioconductor_package_url | Retrieve Bioconductor Package URL
get_commits_since | Retrieve GitHub Commits as Weekly Counts (using curl)
get_cran_package_url | Get CRAN Package URL
get_cran_total_downloads | Get CRAN Total or Recent Downloads for a Package
get_exports | list all package exports
get_github_data | Fetch GitHub Repository Data
get_host_package | Extract and Validate Package Hosting Information
get_internal_package_url | Get Internal Package URL
get_package_download_bioconductor | Get Bioconductor Package Download Statistics
get_package_download_cran | Get CRAN Daily Downloads for a Package
get_package_tarfile | Download R Package Source Tarball
get_pkg_name | get package name for display
get_pubmed_by_year | Get Annual PubMed Article Counts for a Search Term
get_pubmed_count | Get Total Number of PubMed Articles for a Search Term
get_risk_analysis | Get Risk Analysis
get_risk_definition | Get Risk Definition
get_session_dependencies | Get Dependencies
get_suggested_exp_funcs | Function to get suggested exported functions
get_versions | Get Package Versions
install_package_local | Install package locally
is_base | Check if a Package is a Base or Recommended R Package
list_badges | List badges image URLs from a local README
map_test | Map the hierarchy structure of a testthat test file
map_tests_stf | Map the hierarchy structure of tests directory in standard testing framework
modify_description_file | Modify the DESCRIPTION File in a R Package Tarball
parse_bioconductor_releases | Parse Bioconductor Release Announcements
parse_package_info | Parse Package Information from CRAN Archive
print_tree | Print a Package Dependency Tree
risk_assess_pkg | Assess package for risk metrics
risk_assess_pkg_lock_files | Process lock files
run_covr_modes | Run Coverage Analysis with Test Detection
run_covr_skip_nstf | Run Coverage Analysis on Package Source and Tests
run_covr_skip_stf | Run covr with failing tests #' This function runs test coverage and skip analysis for a package using testthat or other supported frameworks.
set_up_pkg | Creates information on package installation
write_summary_report | Write the risk assessment summary report